Failed to perform DATASET 2
Posted: Mon Feb 15, 2016 10:03 am
I am running a band structure calculation on a cluster (64 cores and paral-kgb=1). When the first DATASET is done, the DATASET 2 does not start due to the following error:
I have complied abinit using the following configurations:
I appreciate your help.
----iterations are completed or convergence reached----
outwf: write wavefunction to file output_DS1_WFK, with accesswff 1
File locking failed in ADIOI_Set_lock(fd 16,cmd F_SETLKW/7,type F_WRLCK/1,whence 0) with return value FFFFFFFF and errno 26.
- If the file system is NFS, you need to use NFS version 3, ensure that the lockd daemon is running on all the machines, and mount the directory with the 'noac' option (no attribute caching).
- If the file system is LUSTRE, ensure that the directory is mounted with the 'flock' option.
ADIOI_Set_lock:: Function not implemented
ADIOI_Set_lock:offset 1551170, length 524288
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.
I have complied abinit using the following configurations:
Code: Select all
FCFLAGS_EXTRA="-O2 -mtune=native -march=native -mfpmath=sse -ffree-line-length-$
enable_mpi="yes"
enable_mpi_io="yes"
with_mpi_prefix="/common/sw/alarik/pkg/openmpi/1.6.4/gcc/4.6.2"
with_trio_flavor="netcdf+etsf_io"
with_fft_flavor="fftw3"
with_fft_incs="-I/common/sw/alarik/pkg/intel/14.0/composer_xe_2013_sp1.2.144/mk$
with_fft_libs="-L/common/sw/alarik/pkg/intel/14.0/composer_xe_2013_sp1.2.144/mk$
with_linalg_flavor="mkl"
with_linalg_incs="-I/common/sw/alarik/pkg/intel/14.0/composer_xe_2013_sp1.2.144$
with_linalg_libs="-L/common/sw/alarik/pkg/intel/14.0/composer_xe_2013_sp1.2.144$
with_dft_flavor="atompaw+libxc+wannier90"
enable_clib="yes"
enable_gw_dpc="yes"
enable_memory_profiling="no"
enable_openmp="no"
enable_maintainer_checks="no"
I appreciate your help.