Search found 268 matches

by ilukacevic
Mon May 11, 2015 8:35 am
Forum: Ground state
Topic: Help: how to set up rprim for orthogonal structure
Replies: 14
Views: 8692

Re: Help: how to set up rprim for orthogonal structure

Dear dal,

You can do that easily. Just read the posts above yours and you will find a few different methods to optimize your cell.

Best regards,

Igor
by ilukacevic
Wed Apr 01, 2015 8:44 am
Forum: Response calculations
Topic: How to use foo_EIG2RD to calculate thermal corrections
Replies: 16
Views: 12568

Re: How to use foo_EIG2RD to calculate thermal corrections

Hi! I'm not sure, but this might be useful. From input variables I see If thmflag==3, the list of phonon wavevector from the first list is used (with equal weight for all wavevectors in this list) WARNING : The use of symmetries for the temperature dependence of the eigenenergies is tricky ! It can ...
by ilukacevic
Tue Mar 31, 2015 8:33 am
Forum: Response calculations
Topic: How to use foo_EIG2RD to calculate thermal corrections
Replies: 16
Views: 12568

Re: How to use foo_EIG2RD to calculate thermal corrections

Hi! So I could complete the calculation for the 512 points. For some reason when I divided the points into different sets (different .in files), to have each of them take less amount on the cluster, the calculation would only finish for the first set. I wonder if having the gamma point in the set fo...
by ilukacevic
Thu Mar 26, 2015 9:23 am
Forum: Response calculations
Topic: How to use foo_EIG2RD to calculate thermal corrections
Replies: 16
Views: 12568

Re: How to use foo_EIG2RD to calculate thermal corrections

Hi! I think I will try now just using the 512 points. And yes, it would be great if someone could confirm this. For phonons one has to set kptopt 3, but doesn't need to set nsym to 1. I should think more about this, but why is this? Using symmetries is not appropriate for RF, thus kptopt=3 and nsym=...
by ilukacevic
Tue Mar 24, 2015 8:51 am
Forum: Response calculations
Topic: How to use foo_EIG2RD to calculate thermal corrections
Replies: 16
Views: 12568

Re: How to use foo_EIG2RD to calculate thermal corrections

Hi!

If you need nsym=1, then I suppose that you have to use all 512 k-points (unfortunately). I hope some of the elders will confirm this.

In that case, try to change brav in your anaddb input file. Try first brav=1. And maybe you'll have to play with shifts, too.

Igor
by ilukacevic
Mon Mar 23, 2015 8:43 am
Forum: Ground state
Topic: Optimization of unit cell under stress.
Replies: 3
Views: 3816

Re: Optimization of unit cell under stress.

Hi!

Please, see the old post first

http://forum.abinit.org/viewtopic.php?f=8&t=2185

Best regards,

Igor
by ilukacevic
Mon Mar 23, 2015 8:34 am
Forum: Response calculations
Topic: How to use foo_EIG2RD to calculate thermal corrections
Replies: 16
Views: 12568

Re: How to use foo_EIG2RD to calculate thermal corrections

Hi! Maybe I can give you an answer at least to a part of your question. The dynamical matrix number 2 cannot be built, since no blok with wavevector 0.000000E+00 1.250000E-01 1.250000E-01 This message says that you merged DDBs for wrong q-points (at least one q-point). Please, check whether the list...
by ilukacevic
Mon Feb 02, 2015 9:20 am
Forum: Ground state
Topic: parameters for optimization
Replies: 1
Views: 2075

Re: parameters for optimization

Hi! You can do a little research by your own. You can find all the answers in Tutorials http://www.abinit.org/documentation/helpfiles/for-v7.10/tutorial/lesson_base2.html http://www.abinit.org/documentation/helpfiles/for-v7.10/tutorial/lesson_base3.html and in http://www.abinit.org/documentation/hel...
by ilukacevic
Fri Jan 30, 2015 8:54 am
Forum: Ground state
Topic: error in relaxation
Replies: 1
Views: 2007

Re: error in relaxation

Hi!

I don't know the answer, but I'm 99% sure that you could find it by searching the forum archive. Maybe you should even start with the old mailing list first.

Best regards,

Igor L.
by ilukacevic
Tue Jan 20, 2015 1:56 pm
Forum: Ground state
Topic: How to nonlinear calculation? [SOLVED]
Replies: 2
Views: 4389

Re: How to nonlinear calculation? [SOLVED]

Hi!

Try putting nbdbuf to 0.

Igor
by ilukacevic
Mon Nov 24, 2014 8:44 am
Forum: Ground state
Topic: abinit variables [SOLVED]
Replies: 1
Views: 2665

Re: abinit variables [SOLVED]

Hi!

This is a standard question. Try searching the forum. There are number of posts which deal with this issue. Like

http://forum.abinit.org/viewtopic.php?f=8&t=1322&hilit=supercell

Best regards,

Igor
by ilukacevic
Fri Nov 21, 2014 10:53 am
Forum: Ground state
Topic: black phosphorus input file
Replies: 3
Views: 4444

Re: black phosphorus input file

Yes, you got the atoms wrong. The multiplicity is 16, not 12. You know 8 positions. Use natrd 8 with natom 16 and 8 xred positions which you stated in your previous post (0,0,0) + (1/2,1/2,0) + (x,y,z) (-x,-y+1/2,z+1/2) (-x,y+1/2,-z+1/2) (x,-y,-z) (-x,-y,-z) (x,y+1/2,-z+1/2) (x,-y+1/2,z+1/2) (-x,y,z...
by ilukacevic
Fri Nov 21, 2014 8:54 am
Forum: Ground state
Topic: black phosphorus input file
Replies: 3
Views: 4444

Re: black phosphorus input file

Hi!

I think that an error you got in your output or log file is self explanatory. You used a "tab" while making your input file. And this is not allowed. Delete "tab" spaces and use "space".

Best regards,

Igor
by ilukacevic
Tue Nov 18, 2014 10:53 am
Forum: Ground state
Topic: smearing for projected dos on angular momentum channels
Replies: 4
Views: 4767

Re: smearing for projected dos on angular momentum channels

Try to play with dosdeltae a little http://www.abinit.org/documentation/helpfiles/for-v7.0/input_variables/vargs.html#dosdeltae I think you'll have to trade the precision to get smoothness, but that's smth you'll have to decide yourself. I don't know of any post-processing tool for that. Igor
by ilukacevic
Mon Nov 17, 2014 5:20 pm
Forum: Ground state
Topic: smearing for projected dos on angular momentum channels
Replies: 4
Views: 4767

Re: smearing for projected dos on angular momentum channels

Hi!

I think it occurs because prtdos=3 uses tetrahedron method as prtdos=2. Try using prtdos=1, which uses smearing method to calculate dos.

Best regards,

Igor
by ilukacevic
Wed Nov 12, 2014 10:06 am
Forum: Response calculations
Topic: Phonon in SnO2 at Gamma
Replies: 5
Views: 4688

Re: Phonon in SnO2 at Gamma

Hi!

Maybe the problem is in the pseudopotentials used? It could be that they used different number of valence electrons in their pseudo's. They don't specify in the paper which ones they used.

Best regards,

Igor
by ilukacevic
Mon Nov 10, 2014 8:51 am
Forum: Response calculations
Topic: Phonon in SnO2 at Gamma
Replies: 5
Views: 4688

Re: Phonon in SnO2 at Gamma

Hi! 1] Are your ecut and ngkpt converged wrt phonon frequencies? 2] Are your unit cell and atomic positions relaxed? 3] Did you use the same parameters (ecut, ngkpt,...) for cell relaxation and response function? What value for Pressure do you get in your response function output? Best regards, Igor
by ilukacevic
Tue Apr 15, 2014 12:59 pm
Forum: Ground state
Topic: calculating the graphene DOS using tetrahedron method
Replies: 5
Views: 6934

Re: calculating the graphene DOS using tetrahedron method

Hi! For future reference you can use enunit variable set to 1 ( http://www.abinit.org/documentation/helpfiles/for-v7.6/input_variables/vargs.html#enunit ). This will give you energies in eV. Actually, I'm not sure whether this works for DOS files, too. Try it. As you already have a DOS file, just co...
by ilukacevic
Fri Apr 11, 2014 9:55 am
Forum: Ground state
Topic: [SOLVED] DOS calculations
Replies: 10
Views: 7285

Re: [SOLVED] DOS calculations

Well, one could convert it. But it's much easier to import the wanted columns from the DOS file into Xmgrace (Data -> Import -> ASCII -> Load as Block data). That's it.

Best regards,

Igor
by ilukacevic
Tue Mar 25, 2014 8:38 am
Forum: Ground state
Topic: partial charge density
Replies: 1
Views: 2601

Re: partial charge density

Hi!

For bands you just use "occ" variable, when it comes to printing, to occupy the wanted band and leave the other bands unoccupied (put occ to zero for them).

For k points I'm not sure.

Best regards,

Igor L.
by ilukacevic
Thu Mar 20, 2014 8:15 am
Forum: Ground state
Topic: Ecut of 150????
Replies: 2
Views: 1966

Re: Ecut of 150????

Well, it has to be since you got it from your convergence calcs. HGH pseudos are know to be very "hard", so it could be that's it's no wonder you got 150 Ha.

Best regards,

Igor
by ilukacevic
Fri Mar 14, 2014 10:35 am
Forum: Configuring and compiling ABINIT
Topic: runing abinit in free supercomputer [SOLVED]
Replies: 2
Views: 3984

Re: runing abinit in free supercomputer [SOLVED]

Hi! There are conditionally free computational resources. Basically you have to have a problem which will be your justification that you use resources for computation only. For example, you have to write a project proposal and if it is accepted you can run calculation regarding the project problem. ...
by ilukacevic
Tue Mar 11, 2014 8:22 am
Forum: Response calculations
Topic: elastic constant for metal [SOLVED]
Replies: 2
Views: 3781

Re: elastic constant for metal [SOLVED]

Hi!

I see that you use iscf 5 and 3 in DS 1 and 2. Why don't you try with iscf 7 for the first hand? Then we'll see what's happening.

Igor