This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by ABINIT configure 8.10.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --enable-mpi ## --------- ## ## Platform. ## ## --------- ## hostname = dundee-HP-Z210-Workstation uname -m = x86_64 uname -r = 4.10.0-42-generic uname -s = Linux uname -v = #46~16.04.1-Ubuntu SMP Mon Dec 4 15:57:59 UTC 2017 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/emily/bin PATH: /home/emily/.local/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games PATH: /usr/local/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:3677: checking build system type configure:3691: result: x86_64-unknown-linux-gnu configure:3711: checking host system type configure:3724: result: x86_64-unknown-linux-gnu configure:3744: checking target system type configure:3757: result: x86_64-unknown-linux-gnu configure:3801: checking for a BSD-compatible install configure:3869: result: /usr/bin/install -c configure:3880: checking whether build environment is sane configure:3935: result: yes configure:4086: checking for a thread-safe mkdir -p configure:4125: result: /bin/mkdir -p configure:4132: checking for gawk configure:4148: found /usr/bin/gawk configure:4159: result: gawk configure:4170: checking whether make sets $(MAKE) configure:4192: result: yes configure:4221: checking whether make supports nested variables configure:4238: result: yes configure:4327: checking whether UID '1003' is supported by ustar format configure:4330: result: yes configure:4337: checking whether GID '1003' is supported by ustar format configure:4340: result: yes configure:4348: checking how to create a ustar tar archive configure:4359: tar --version tar (GNU tar) 1.28 Copyright (C) 2014 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:4362: $? = 0 configure:4402: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:4405: $? = 0 configure:4409: tar -xf - all OK configure:8280: configure:8289: checking consistency of experimental options configure:8304: |---> all OK configure:8307: configure:8316: checking consistency of maintainer options configure:8329: |---> all OK configure:8332: configure:8341: parsing command-line options configure:9517: Initializing MPI support configure:9724: compiler checks deferred configure:10022: GPU support disabled from command-line configure:10065: checking for sh configure:10083: found /bin/sh configure:10096: result: /bin/sh configure:10106: checking for mv configure:10124: found /bin/mv configure:10137: result: /bin/mv configure:10147: checking for perl configure:10165: found /usr/bin/perl configure:10178: result: /usr/bin/perl configure:10188: checking for rm configure:10206: found /bin/rm configure:10219: result: /bin/rm configure:10232: checking for patch configure:10248: found /usr/bin/patch configure:10259: result: patch configure:10274: checking for tar configure:10290: found /bin/tar configure:10301: result: tar configure:10667: checking for gcc configure:10683: found /usr/bin/gcc configure:10694: result: gcc configure:10923: checking for C compiler version configure:10932: gcc --version >&5 gcc (Ubuntu 5.4.0-6ubuntu1~16.04.11) 5.4.0 20160609 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:10943: $? = 0 configure:10932: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.11' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.11) configure:10943: $? = 0 configure:10932: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:10943: $? = 1 configure:10932: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:10943: $? = 1 configure:10963: checking whether the C compiler works configure:10985: gcc conftest.c >&5 configure:10989: $? = 0 configure:11037: result: yes configure:11040: checking for C compiler default output file name configure:11042: result: a.out configure:11048: checking for suffix of executables configure:11055: gcc -o conftest conftest.c >&5 configure:11059: $? = 0 configure:11081: result: configure:11103: checking whether we are cross compiling configure:11111: gcc -o conftest conftest.c >&5 configure:11115: $? = 0 configure:11122: ./conftest configure:11126: $? = 0 configure:11141: result: no configure:11146: checking for suffix of object files configure:11168: gcc -c conftest.c >&5 configure:11172: $? = 0 configure:11193: result: o configure:11197: checking whether we are using the GNU C compiler configure:11216: gcc -c conftest.c >&5 configure:11216: $? = 0 configure:11225: result: yes configure:11234: checking whether gcc accepts -g configure:11254: gcc -c -g conftest.c >&5 configure:11254: $? = 0 configure:11295: result: yes configure:11312: checking for gcc option to accept ISO C89 configure:11375: gcc -c -g -O2 conftest.c >&5 configure:11375: $? = 0 configure:11388: result: none needed configure:11419: checking for style of include used by make configure:11447: result: GNU configure:11473: checking dependency style of gcc configure:11584: result: gcc3 configure:11656: checking how to run the C preprocessor configure:11687: gcc -E conftest.c configure:11687: $? = 0 configure:11701: gcc -E conftest.c conftest.c:18:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:11701: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | /* end confdefs.h. */ | #include configure:11726: result: gcc -E configure:11746: gcc -E conftest.c configure:11746: $? = 0 configure:11760: gcc -E conftest.c conftest.c:18:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:11760: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | /* end confdefs.h. */ | #include configure:11800: checking which type of compiler we have configure:12017: result: gnu 5.4 configure:12032: checking for ANSI C header files configure:12052: gcc -c conftest.c >&5 configure:12052: $? = 0 configure:12125: gcc -o conftest conftest.c >&5 configure:12125: $? = 0 configure:12125: ./conftest configure:12125: $? = 0 configure:12136: result: yes configure:12149: checking for sys/types.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for sys/stat.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for stdlib.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for string.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for memory.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for strings.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for inttypes.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for stdint.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12149: checking for unistd.h configure:12149: gcc -c conftest.c >&5 configure:12149: $? = 0 configure:12149: result: yes configure:12161: checking whether byte ordering is bigendian configure:12176: gcc -c conftest.c >&5 conftest.c:30:9: error: unknown type name 'not' not a universal capable compiler ^ conftest.c:30:15: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'universal' not a universal capable compiler ^ conftest.c:30:15: error: unknown type name 'universal' configure:12176: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:12221: gcc -c conftest.c >&5 configure:12221: $? = 0 configure:12239: gcc -c conftest.c >&5 conftest.c: In function 'main': conftest.c:36:4: error: unknown type name 'not' not big endian ^ conftest.c:36:12: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian' not big endian ^ configure:12239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:12367: result: no configure:12386: checking whether to enable assertions configure:12404: result: yes configure:12412: checking malloc.h usability configure:12412: gcc -c conftest.c >&5 configure:12412: $? = 0 configure:12412: result: yes configure:12412: checking malloc.h presence configure:12412: gcc -E conftest.c configure:12412: $? = 0 configure:12412: result: yes configure:12412: checking for malloc.h configure:12412: result: yes configure:12805: checking for g++ configure:12835: result: no configure:12805: checking for c++ configure:12835: result: no configure:12805: checking for gpp configure:12835: result: no configure:12805: checking for aCC configure:12835: result: no configure:12805: checking for CC configure:12835: result: no configure:12805: checking for cxx configure:12835: result: no configure:12805: checking for cc++ configure:12835: result: no configure:12805: checking for cl.exe configure:12835: result: no configure:12805: checking for FCC configure:12835: result: no configure:12805: checking for KCC configure:12835: result: no configure:12805: checking for RCC configure:12835: result: no configure:12805: checking for xlC_r configure:12835: result: no configure:12805: checking for xlC configure:12835: result: no configure:12859: checking for C++ compiler version configure:12868: g++ --version >&5 ./configure: line 12870: g++: command not found configure:12879: $? = 127 configure:12868: g++ -v >&5 ./configure: line 12870: g++: command not found configure:12879: $? = 127 configure:12868: g++ -V >&5 ./configure: line 12870: g++: command not found configure:12879: $? = 127 configure:12868: g++ -qversion >&5 ./configure: line 12870: g++: command not found configure:12879: $? = 127 configure:12883: checking whether we are using the GNU C++ compiler configure:12902: g++ -c conftest.cpp >&5 ./configure: line 2646: g++: command not found configure:12902: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | | int | main () | { | #ifndef __GNUC__ | choke me | #endif | | ; | return 0; | } configure:12911: result: no configure:12920: checking whether g++ accepts -g configure:12940: g++ -c -g conftest.cpp >&5 ./configure: line 2646: g++: command not found configure:12940: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:12955: g++ -c conftest.cpp >&5 ./configure: line 2646: g++: command not found configure:12955: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:12971: g++ -c -g conftest.cpp >&5 ./configure: line 2646: g++: command not found configure:12971: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:12981: result: no configure:13006: checking dependency style of g++ configure:13117: result: none configure:13146: checking which type of C++ compiler we have configure:13363: result: generic 0.0 configure:13734: checking for gfortran configure:13750: found /usr/bin/gfortran configure:13761: result: gfortran configure:13787: checking for Fortran compiler version configure:13796: gfortran --version >&5 GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.11) 5.4.0 20160609 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:13807: $? = 0 configure:13796: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.11' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.11) configure:13807: $? = 0 configure:13796: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:13807: $? = 1 configure:13796: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:13807: $? = 1 configure:13816: checking whether we are using the GNU Fortran compiler configure:13829: gfortran -c conftest.F >&5 configure:13829: $? = 0 configure:13838: result: yes configure:13844: checking whether gfortran accepts -g configure:13855: gfortran -c -g conftest.f >&5 configure:13855: $? = 0 configure:13863: result: yes configure:13960: checking which type of Fortran compiler we have configure:14319: result: gnu 5.4 configure:14332: checking fortran 90 modules extension configure:14359: gfortran -c -g -O2 conftest.f >&5 configure:14359: $? = 0 configure:14382: result: mod configure:14396: checking for Fortran flag to compile .F90 files configure:14416: gfortran -c -g -O2 conftest.F90 >&5 configure:14416: $? = 0 configure:14425: result: none configure:14461: determining Fortran module case configure:14475: gfortran -c -g -O2 conftest.F90 >&5 configure:14475: $? = 0 configure:14499: checking whether Fortran modules are upper-case configure:14501: result: no configure:14518: checking how to get verbose linking output from gfortran configure:14528: gfortran -c conftest.F90 >&5 configure:14528: $? = 0 configure:14546: gfortran -o conftest -v conftest.F90 Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.11) /usr/lib/gcc/x86_64-linux-gnu/5/f951 conftest.F90 -cpp=/tmp/ccRfQIE8.f90 -quiet -v -imultiarch x86_64-linux-gnu conftest.F90 -quiet -dumpbase conftest.F90 -mtune=generic -march=x86-64 -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/5/finclude -o /tmp/cctQf3ay.s GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.11) version 5.4.0 20160609 (x86_64-linux-gnu) compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/5/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: /usr/lib/gcc/x86_64-linux-gnu/5/finclude /usr/lib/gcc/x86_64-linux-gnu/5/include /usr/local/include /usr/lib/gcc/x86_64-linux-gnu/5/include-fixed /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU Fortran2008 (Ubuntu 5.4.0-6ubuntu1~16.04.11) version 5.4.0 20160609 (x86_64-linux-gnu) compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/ccd37YJX.o /tmp/cctQf3ay.s GNU assembler version 2.26.1 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.26.1 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/5/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/5/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/5/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper -plugin-opt=-fresolution=/tmp/ccuVXKjn.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbegin.o -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. /tmp/ccd37YJX.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/5/crtend.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o configure:14629: result: -v configure:14631: checking for Fortran libraries of gfortran configure:14654: gfortran -o conftest -v conftest.F90 Using built-in specs. Target: x86_64-linux-gnu Thread model: posix gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.11) /usr/lib/gcc/x86_64-linux-gnu/5/f951 conftest.F90 -cpp=/tmp/ccDJtLY9.f90 -quiet -v -imultiarch x86_64-linux-gnu conftest.F90 -quiet -dumpbase conftest.F90 -mtune=generic -march=x86-64 -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/5/finclude -o /tmp/cclmanGz.s GNU Fortran (Ubuntu 5.4.0-6ubuntu1~16.04.11) version 5.4.0 20160609 (x86_64-linux-gnu) compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/5/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: /usr/lib/gcc/x86_64-linux-gnu/5/finclude /usr/lib/gcc/x86_64-linux-gnu/5/include /usr/local/include /usr/lib/gcc/x86_64-linux-gnu/5/include-fixed /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU Fortran2008 (Ubuntu 5.4.0-6ubuntu1~16.04.11) version 5.4.0 20160609 (x86_64-linux-gnu) compiled by GNU C version 5.4.0 20160609, GMP version 6.1.0, MPFR version 3.1.4, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/ccYUzlqZ.o /tmp/cclmanGz.s GNU assembler version 2.26.1 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.26.1 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/5/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/5/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/5/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper -plugin-opt=-fresolution=/tmp/cc3zoabp.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbegin.o -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. /tmp/ccYUzlqZ.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/5/crtend.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o configure:14850: result: -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath configure:14866: checking for dummy main to link with Fortran libraries configure:14900: gcc -o conftest conftest.c -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5 configure:14900: $? = 0 configure:14945: result: none configure:14978: checking for Fortran name-mangling scheme configure:14991: gfortran -c conftest.F90 >&5 configure:14991: $? = 0 configure:15032: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/cc7CN50K.o: In function `main': conftest.c:(.text+0xa): undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:15032: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:15032: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5 configure:15032: $? = 0 configure:15090: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5 configure:15090: $? = 0 configure:15132: result: lower case, underscore, no extra underscore configure:15238: checking for python configure:15254: found /usr/bin/python configure:15265: result: python configure:15278: checking for Python CPPFLAGS configure:15293: result: -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include configure:15302: checking for bzr configure:15332: result: no configure:15347: checking Python.h usability configure:15347: gcc -c -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include conftest.c >&5 conftest.c:67:20: fatal error: Python.h: No such file or directory compilation terminated. configure:15347: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:15347: result: no configure:15347: checking Python.h presence configure:15347: gcc -E -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include conftest.c conftest.c:34:20: fatal error: Python.h: No such file or directory compilation terminated. configure:15347: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include configure:15347: result: no configure:15347: checking for Python.h configure:15347: result: no configure:15478: WARNING: your Python development environment is not working configure:15774: checking for ar configure:15790: found /usr/bin/ar configure:15801: result: ar configure:15862: checking for ranlib configure:15878: found /usr/bin/ranlib configure:15889: result: ranlib configure:15959: checking for cpp configure:15975: found /usr/bin/cpp configure:15986: result: cpp configure:16045: checking for a true C preprocessor configure:16051: result: cpp configure:16098: checking which cpp hints to apply configure:16127: result: default/default/default configure:16136: checking which cc hints to apply configure:16191: result: gnu/default/default configure:16202: checking which xpp hints to apply configure:16206: result: none/none/none configure:16215: checking which cxx hints to apply configure:16262: result: none/none/none configure:16273: checking which fpp hints to apply configure:16291: result: default/default/default configure:16300: checking which fc hints to apply configure:16558: result: gnu/default/default configure:16569: checking which ar hints to apply configure:16587: result: none/none/none configure:16605: checking which Fortran preprocessor to use configure:16607: result: configure:16609: checking which Fortran preprocessor flags to apply configure:16611: result: configure:16629: checking whether to wrap Fortran compiler calls configure:16631: result: no configure:16673: checking debugging status configure:16696: result: enabled (profile mode: basic) configure:16717: setting C debug flags to '-g' configure:16733: setting Fortran debug flags to '-g' configure:16739: checking whether to activate debug mode in source files configure:16751: result: no configure:16754: checking whether to activate debug verbosity in source files configure:16764: result: no configure:16776: checking which cc debug flags to apply configure:16837: result: gnu/default/default configure:16851: checking which cxx debug flags to apply configure:16855: result: none/none/none configure:16869: checking which fc debug flags to apply configure:17124: result: gnu/default/default configure:17144: checking whether to activate design-by-contract debugging configure:17153: result: no configure:17198: checking optimization status configure:17221: result: enabled (profile mode: standard) configure:17246: checking which cc optimizations to apply configure:17461: result: gnu/default/default configure:17475: checking which cxx optimizations to apply configure:17633: result: none/none/none configure:17647: checking which fc optimizations to apply configure:18257: result: gnu/default/default configure:18275: checking whether to apply per-directory optimizations configure:18281: result: yes configure:18851: optimization for 43_ptgroups is -O0 configure:19890: checking for a 64-bit architecture configure:19892: result: yes configure:19894: checking whether to use 64-bit flags configure:19896: result: no configure:19898: checking for user-defined 64-bit flags configure:19900: result: configure:20098: static builds may be performed configure:20145: checking stddef.h usability configure:20145: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20145: $? = 0 configure:20145: result: yes configure:20145: checking stddef.h presence configure:20145: gcc -E conftest.c configure:20145: $? = 0 configure:20145: result: yes configure:20145: checking for stddef.h configure:20145: result: yes configure:20145: checking stdarg.h usability configure:20145: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20145: $? = 0 configure:20145: result: yes configure:20145: checking stdarg.h presence configure:20145: gcc -E conftest.c configure:20145: $? = 0 configure:20145: result: yes configure:20145: checking for stdarg.h configure:20145: result: yes configure:20158: checking stdio.h usability configure:20158: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking stdio.h presence configure:20158: gcc -E conftest.c configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking for stdio.h configure:20158: result: yes configure:20158: checking math.h usability configure:20158: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking math.h presence configure:20158: gcc -E conftest.c configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking for math.h configure:20158: result: yes configure:20158: checking termios.h usability configure:20158: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking termios.h presence configure:20158: gcc -E conftest.c configure:20158: $? = 0 configure:20158: result: yes configure:20158: checking for termios.h configure:20158: result: yes configure:20170: checking errno.h usability configure:20170: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20170: $? = 0 configure:20170: result: yes configure:20170: checking errno.h presence configure:20170: gcc -E conftest.c configure:20170: $? = 0 configure:20170: result: yes configure:20170: checking for errno.h configure:20170: result: yes configure:20183: checking for malloc.h configure:20183: result: yes configure:20183: checking sys/malloc.h usability configure:20183: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:75:24: fatal error: sys/malloc.h: No such file or directory compilation terminated. configure:20183: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_gnu5.4" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:20183: result: no configure:20183: checking sys/malloc.h presence configure:20183: gcc -E conftest.c conftest.c:42:24: fatal error: sys/malloc.h: No such file or directory compilation terminated. configure:20183: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_gnu5.4" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | #include configure:20183: result: no configure:20183: checking for sys/malloc.h configure:20183: result: no configure:20195: checking mcheck.h usability configure:20195: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20195: $? = 0 configure:20195: result: yes configure:20195: checking mcheck.h presence configure:20195: gcc -E conftest.c configure:20195: $? = 0 configure:20195: result: yes configure:20195: checking for mcheck.h configure:20195: result: yes configure:20207: checking sys/time.h usability configure:20207: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20207: $? = 0 configure:20207: result: yes configure:20207: checking sys/time.h presence configure:20207: gcc -E conftest.c configure:20207: $? = 0 configure:20207: result: yes configure:20207: checking for sys/time.h configure:20207: result: yes configure:20219: checking sys/resource.h usability configure:20219: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20219: $? = 0 configure:20219: result: yes configure:20219: checking sys/resource.h presence configure:20219: gcc -E conftest.c configure:20219: $? = 0 configure:20219: result: yes configure:20219: checking for sys/resource.h configure:20219: result: yes configure:20235: checking for abort configure:20235: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:68:6: warning: conflicting types for built-in function 'abort' char abort (); ^ configure:20235: $? = 0 configure:20235: result: yes configure:20246: checking for mallinfo configure:20246: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20246: $? = 0 configure:20246: result: yes configure:20263: checking size of char configure:20268: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20268: $? = 0 configure:20268: ./conftest configure:20268: $? = 0 configure:20282: result: 1 configure:20296: checking size of short configure:20301: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20301: $? = 0 configure:20301: ./conftest configure:20301: $? = 0 configure:20315: result: 2 configure:20329: checking size of int configure:20334: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20334: $? = 0 configure:20334: ./conftest configure:20334: $? = 0 configure:20348: result: 4 configure:20362: checking size of long configure:20367: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20367: $? = 0 configure:20367: ./conftest configure:20367: $? = 0 configure:20381: result: 8 configure:20395: checking size of long long configure:20400: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20400: $? = 0 configure:20400: ./conftest configure:20400: $? = 0 configure:20414: result: 8 configure:20428: checking size of unsigned int configure:20433: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20433: $? = 0 configure:20433: ./conftest configure:20433: $? = 0 configure:20447: result: 4 configure:20461: checking size of unsigned long configure:20466: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20466: $? = 0 configure:20466: ./conftest configure:20466: $? = 0 configure:20480: result: 8 configure:20494: checking size of unsigned long long configure:20499: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20499: $? = 0 configure:20499: ./conftest configure:20499: $? = 0 configure:20513: result: 8 configure:20527: checking size of float configure:20532: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20532: $? = 0 configure:20532: ./conftest configure:20532: $? = 0 configure:20546: result: 4 configure:20560: checking size of double configure:20565: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20565: $? = 0 configure:20565: ./conftest configure:20565: $? = 0 configure:20579: result: 8 configure:20593: checking size of long double configure:20598: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20598: $? = 0 configure:20598: ./conftest configure:20598: $? = 0 configure:20612: result: 16 configure:20626: checking size of size_t configure:20631: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20631: $? = 0 configure:20631: ./conftest configure:20631: $? = 0 configure:20645: result: 8 configure:20659: checking size of ptrdiff_t configure:20664: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 configure:20664: $? = 0 configure:20664: ./conftest configure:20664: $? = 0 configure:20678: result: 8 configure:20689: checking for an ANSI C-conforming const configure:20763: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20763: $? = 0 configure:20770: result: yes configure:20778: checking for size_t configure:20778: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 configure:20778: $? = 0 configure:20778: gcc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c: In function 'main': conftest.c:104:21: error: expected expression before ')' token if (sizeof ((size_t))) ^ configure:20778: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_gnu5.4" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_ABORT 1 | #define HAVE_MALLINFO 1 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:20778: result: yes configure:20796: checking whether the Fortran compiler accepts the ASYNCHRONOUS attribute configure:20811: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:20811: $? = 0 configure:20829: result: yes configure:20835: checking whether the Gfortran compiler supports BACKTRACE configure:20851: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:20851: $? = 0 configure:20869: result: yes configure:20875: checking whether the Fortran compiler supports GET_COMMAND_ARGUMENT configure:20898: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:20898: $? = 0 configure:20916: result: yes configure:20922: checking whether the Fortran compiler supports EXECUTE_COMMAND_LINE configure:20943: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:20943: $? = 0 configure:20961: result: yes configure:20967: checking whether the Fortran compiler supports SYSTEM configure:20982: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:20982: $? = 0 configure:21000: result: yes configure:21006: checking whether the Fortran compiler accepts the CONTIGUOUS attribute configure:21026: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21026: $? = 0 configure:21044: result: yes configure:21050: checking whether the Fortran compiler supports allocatable arrays in datatypes configure:21074: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21074: $? = 0 configure:21092: result: yes configure:21098: checking whether the Fortran compiler supports IEEE_EXCEPTIONS configure:21119: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21119: $? = 0 configure:21137: result: yes configure:21143: checking whether the Fortran compiler supports IOMSG configure:21165: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21165: $? = 0 configure:21183: result: yes configure:21189: checking whether the Fortran compiler provides the iso_c_binding module configure:21211: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21211: $? = 0 configure:21231: result: yes configure:21237: checking whether the Fortran compiler accepts exit() configure:21252: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21252: $? = 0 configure:21270: result: yes configure:21276: checking whether the Fortran compiler accepts flush() configure:21291: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21291: $? = 0 configure:21309: result: yes configure:21315: checking whether the Fortran compiler accepts flush_() configure:21330: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 /tmp/ccPI2vl0.o: In function `MAIN__': /home/emily/abinit-8.10.2/conftest.F90:3: undefined reference to `flush__' collect2: error: ld returned 1 exit status configure:21330: $? = 1 configure: failed program was: | program main | | call flush_(1) | | end configure:21348: result: no configure:21354: checking whether the Fortran compiler accepts gamma() configure:21370: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21370: $? = 0 configure:21388: result: yes configure:21394: checking whether the Fortran compiler accepts getenv() configure:21411: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21411: $? = 0 configure:21429: result: yes configure:21447: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 /tmp/cc1WJNW9.o: In function `MAIN__': /home/emily/abinit-8.10.2/conftest.F90:3: undefined reference to `getpid_' collect2: error: ld returned 1 exit status configure:21447: $? = 1 configure: failed program was: | program main | | call getpid() | | end configure:21459: checking whether the Fortran compiler accepts getpid() configure:21461: result: no configure:21472: checking whether the Fortran compiler accepts quadruple integers configure:21488: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21488: $? = 0 configure:21507: result: yes configure:21513: checking whether the Fortran compiler supports 2008 standard in ISO_FORTRAN_ENV configure:21528: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21528: $? = 0 configure:21546: result: yes configure:21552: checking whether the Fortran compiler accepts long lines configure:21567: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21567: $? = 0 configure:21585: result: yes configure:21593: checking whether the Fortran compiler supports \newline in CPP macros configure:21610: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 conftest.F90:4:23: print *,"foo1" NEWLINE print *,"foo2" 1 Error: Syntax error in PRINT statement at (1) configure:21610: $? = 1 configure: failed program was: | program main | | # define NEWLINE \newline | print *,"foo1" NEWLINE print *,"foo2" | | | end configure:21628: result: no configure:21634: checking whether the Fortran compiler supports MOVE_ALLOC (F2003) configure:21652: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21652: $? = 0 configure:21670: result: yes configure:21676: checking whether the Fortran compiler accepts the PRIVATE attribute configure:21694: gfortran -c -g -ffree-line-length-none conftest.F90 >&5 configure:21694: $? = 0 configure:21717: result: yes configure:21723: checking whether the Fortran compiler accepts the PROTECTED attribute configure:21738: gfortran -c -g -ffree-line-length-none conftest.F90 >&5 configure:21738: $? = 0 configure:21761: result: yes configure:21767: checking whether the Fortran compiler supports stream IO configure:21791: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21791: $? = 0 configure:21809: result: yes configure:21815: checking whether the Fortran compiler accepts cpu_time() configure:21832: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:21832: $? = 0 configure:21850: result: yes configure:21858: checking whether the Fortran compiler accepts etime() configure:21873: gfortran -o conftest -g -ffree-line-length-none conftest.F90 >&5 conftest.F90:3:25: call etime(1) 1 Error: Missing actual argument 'time' in call to 'etime' at (1) configure:21873: $? = 1 configure: failed program was: | program main | | call etime(1) | | end configure:21891: result: no configure:21896: checking whether to use C clock for timings configure:21898: result: no configure:21946: checking whether to enable OpenMP support configure:21948: result: no configure:22026: checking whether to build MPI code configure:22028: result: yes configure:22037: checking whether the C compiler supports MPI configure:22307: gcc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:83:17: fatal error: mpi.h: No such file or directory compilation terminated. configure:22307: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_gnu5.4" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_ABORT 1 | #define HAVE_MALLINFO 1 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define HAVE_FC_ASYNC 1 | #define HAVE_FC_BACKTRACE 1 | #define HAVE_FC_COMMAND_ARGUMENT 1 | #define HAVE_FC_COMMAND_LINE 1 | #define HAVE_FC_SYSTEM 1 | #define HAVE_FC_CONTIGUOUS 1 | #define HAVE_FC_ALLOCATABLE_DTARRAYS 1 | #define HAVE_FC_IEEE_EXCEPTIONS 1 | #define HAVE_FC_IOMSG 1 | #define HAVE_FC_ISO_C_BINDING 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GAMMA 1 | #define HAVE_FC_GETENV 1 | #define HAVE_FC_INT_QUAD 1 | #define HAVE_FC_ISO_FORTRAN_2008 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_MOVE_ALLOC 1 | #define HAVE_FC_PRIVATE 1 | #define HAVE_FC_PROTECTED 1 | #define HAVE_FC_STREAM_IO 1 | #define HAVE_FC_CPUTIME 1 | /* end confdefs.h. */ | #include | #include "mpi.h" | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | int rc; | | MPI_Init(NULL,NULL); | rc = MPI_Finalize(); | | ; | return 0; | } configure:22553: result: no configure:22559: checking whether the C++ compiler supports MPI configure:22826: g++ -o conftest conftest.cpp >&5 ./configure: line 3232: g++: command not found configure:22826: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "8.10.2" | #define PACKAGE_STRING "ABINIT 8.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE_URL "" | #define PACKAGE "abinit" | #define VERSION "8.10.2" | #define ABINIT_VERSION "8.10.2" | #define ABINIT_VERSION_MAJOR "8" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20190604" | #define ABINIT_VERSION_BASE "8.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_MALLOC_H 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_gnu5.4" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_ABORT 1 | #define HAVE_MALLINFO 1 | #define SIZEOF_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 16 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define HAVE_FC_ASYNC 1 | #define HAVE_FC_BACKTRACE 1 | #define HAVE_FC_COMMAND_ARGUMENT 1 | #define HAVE_FC_COMMAND_LINE 1 | #define HAVE_FC_SYSTEM 1 | #define HAVE_FC_CONTIGUOUS 1 | #define HAVE_FC_ALLOCATABLE_DTARRAYS 1 | #define HAVE_FC_IEEE_EXCEPTIONS 1 | #define HAVE_FC_IOMSG 1 | #define HAVE_FC_ISO_C_BINDING 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GAMMA 1 | #define HAVE_FC_GETENV 1 | #define HAVE_FC_INT_QUAD 1 | #define HAVE_FC_ISO_FORTRAN_2008 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_MOVE_ALLOC 1 | #define HAVE_FC_PRIVATE 1 | #define HAVE_FC_PROTECTED 1 | #define HAVE_FC_STREAM_IO 1 | #define HAVE_FC_CPUTIME 1 | /* end confdefs.h. */ | #include "mpi.h" | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | MPI::Init(); | MPI::Finalize(); | | ; | return 0; | } configure:23072: result: no configure:23078: checking whether the Fortran Compiler supports MPI configure:23332: gfortran -o conftest -g -ffree-line-length-none conftest.F90 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath >&5 conftest.F90:3: Error: Can't open included file 'mpif.h' configure:23332: $? = 1 configure: failed program was: | program main | | include "mpif.h" | integer :: ierr | call mpi_init(ierr) | call mpi_finalize(ierr) | | end configure:23578: result: no configure:23587: checking whether MPI is usable configure:23589: result: no configure:23600: error: MPI support is broken - please fix your config parameters and/or MPI installation ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_cxx_compiler_gnu=no ac_cv_env_ARFLAGS_DEBUG_set= ac_cv_env_ARFLAGS_DEBUG_value= ac_cv_env_ARFLAGS_EXTRA_set= ac_cv_env_ARFLAGS_EXTRA_value= ac_cv_env_ARFLAGS_OPTIM_set= ac_cv_env_ARFLAGS_OPTIM_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_LDFLAGS_DEBUG_set= ac_cv_env_CC_LDFLAGS_DEBUG_value= ac_cv_env_CC_LDFLAGS_OPTIM_set= ac_cv_env_CC_LDFLAGS_OPTIM_value= ac_cv_env_CC_LDFLAGS_set= ac_cv_env_CC_LDFLAGS_value= ac_cv_env_CC_LIBS_DEBUG_set= ac_cv_env_CC_LIBS_DEBUG_value= ac_cv_env_CC_LIBS_OPTIM_set= ac_cv_env_CC_LIBS_OPTIM_value= ac_cv_env_CC_LIBS_set= ac_cv_env_CC_LIBS_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_DEBUG_set= ac_cv_env_CFLAGS_DEBUG_value= ac_cv_env_CFLAGS_EXTRA_set= ac_cv_env_CFLAGS_EXTRA_value= ac_cv_env_CFLAGS_OPTIM_set= ac_cv_env_CFLAGS_OPTIM_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_DEBUG_set= ac_cv_env_CPPFLAGS_DEBUG_value= ac_cv_env_CPPFLAGS_EXTRA_set= ac_cv_env_CPPFLAGS_EXTRA_value= ac_cv_env_CPPFLAGS_OPTIM_set= ac_cv_env_CPPFLAGS_OPTIM_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_DEBUG_set= ac_cv_env_CXXFLAGS_DEBUG_value= ac_cv_env_CXXFLAGS_EXTRA_set= ac_cv_env_CXXFLAGS_EXTRA_value= ac_cv_env_CXXFLAGS_OPTIM_set= ac_cv_env_CXXFLAGS_OPTIM_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_LDFLAGS_DEBUG_set= ac_cv_env_CXX_LDFLAGS_DEBUG_value= ac_cv_env_CXX_LDFLAGS_EXTRA_set= ac_cv_env_CXX_LDFLAGS_EXTRA_value= ac_cv_env_CXX_LDFLAGS_OPTIM_set= ac_cv_env_CXX_LDFLAGS_OPTIM_value= ac_cv_env_CXX_LDFLAGS_set= ac_cv_env_CXX_LDFLAGS_value= ac_cv_env_CXX_LIBS_DEBUG_set= ac_cv_env_CXX_LIBS_DEBUG_value= ac_cv_env_CXX_LIBS_OPTIM_set= ac_cv_env_CXX_LIBS_OPTIM_value= ac_cv_env_CXX_LIBS_set= ac_cv_env_CXX_LIBS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_FCFLAGS_DEBUG_set= ac_cv_env_FCFLAGS_DEBUG_value= ac_cv_env_FCFLAGS_EXTRA_set= ac_cv_env_FCFLAGS_EXTRA_value= ac_cv_env_FCFLAGS_FIXEDFORM_set= ac_cv_env_FCFLAGS_FIXEDFORM_value= ac_cv_env_FCFLAGS_FREEFORM_set= ac_cv_env_FCFLAGS_FREEFORM_value= ac_cv_env_FCFLAGS_HINTS_set= ac_cv_env_FCFLAGS_HINTS_value= ac_cv_env_FCFLAGS_MODDIR_set= ac_cv_env_FCFLAGS_MODDIR_value= ac_cv_env_FCFLAGS_OPENMP_set= ac_cv_env_FCFLAGS_OPENMP_value= ac_cv_env_FCFLAGS_OPTIM_set= ac_cv_env_FCFLAGS_OPTIM_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_LDFLAGS_DEBUG_set= ac_cv_env_FC_LDFLAGS_DEBUG_value= ac_cv_env_FC_LDFLAGS_EXTRA_set= ac_cv_env_FC_LDFLAGS_EXTRA_value= ac_cv_env_FC_LDFLAGS_OPTIM_set= ac_cv_env_FC_LDFLAGS_OPTIM_value= ac_cv_env_FC_LDFLAGS_set= ac_cv_env_FC_LDFLAGS_value= ac_cv_env_FC_LIBS_DEBUG_set= ac_cv_env_FC_LIBS_DEBUG_value= ac_cv_env_FC_LIBS_OPTIM_set= ac_cv_env_FC_LIBS_OPTIM_value= ac_cv_env_FC_LIBS_set= ac_cv_env_FC_LIBS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FPPFLAGS_DEBUG_set= ac_cv_env_FPPFLAGS_DEBUG_value= ac_cv_env_FPPFLAGS_EXTRA_set= ac_cv_env_FPPFLAGS_EXTRA_value= ac_cv_env_FPPFLAGS_OPTIM_set= ac_cv_env_FPPFLAGS_OPTIM_value= ac_cv_env_FPPFLAGS_set= ac_cv_env_FPPFLAGS_value= ac_cv_env_FPP_set= ac_cv_env_FPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPI_RUNNER_set= ac_cv_env_MPI_RUNNER_value= ac_cv_env_PYFLAGS_set= ac_cv_env_PYFLAGS_value= ac_cv_env_PYTHON_CPPFLAGS_set= ac_cv_env_PYTHON_CPPFLAGS_value= ac_cv_env_SERIAL_RUNNER_set= ac_cv_env_SERIAL_RUNNER_value= ac_cv_env_XPPFLAGS_DEBUG_set= ac_cv_env_XPPFLAGS_DEBUG_value= ac_cv_env_XPPFLAGS_EXTRA_set= ac_cv_env_XPPFLAGS_EXTRA_value= ac_cv_env_XPPFLAGS_OPTIM_set= ac_cv_env_XPPFLAGS_OPTIM_value= ac_cv_env_XPPFLAGS_set= ac_cv_env_XPPFLAGS_value= ac_cv_env_XPP_set= ac_cv_env_XPP_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_dummy_main=none ac_cv_fc_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_srcext_F90=none ac_cv_fortran_dummy_main=none ac_cv_func_abort=yes ac_cv_func_mallinfo=yes ac_cv_header_Python_h=no ac_cv_header_errno_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_math_h=yes ac_cv_header_mcheck_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_malloc_h=no ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_termios_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_objext=o ac_cv_path_BOURNE_SHELL=/bin/sh ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_path_MV=/bin/mv ac_cv_path_PERL=/usr/bin/perl ac_cv_path_RM=/bin/rm ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_PATCH=patch ac_cv_prog_PYTHON=python ac_cv_prog_TAR=tar ac_cv_prog_TRUE_CPP=cpp ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_FC=gfortran ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=no ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_char=1 ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_double=16 ac_cv_sizeof_long_long=8 ac_cv_sizeof_ptrdiff_t=8 ac_cv_sizeof_short=2 ac_cv_sizeof_size_t=8 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long=8 ac_cv_sizeof_unsigned_long_long=8 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=none am_cv_make_support_nested_variables=yes am_cv_prog_tar_ustar=gnutar ax_cv_f90_modext=mod ## ----------------- ## ## Output variables. ## ## ----------------- ## ABINIT_BINARY_PACKAGE='abinit-8.10.2_x86_64_linux_gnu5.4' ABINIT_TARGET='x86_64_linux_gnu5.4' ABINIT_VERSION='8.10.2' ABINIT_VERSION_BASE='8.10' ABINIT_VERSION_BUILD='20190604' ABINIT_VERSION_MAJOR='8' ABINIT_VERSION_MICRO='2' ABINIT_VERSION_MINOR='10' ABI_CPPFLAGS='' ACLOCAL='${SHELL} /home/emily/abinit-8.10.2/config/gnu/missing aclocal-1.13' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' ARFLAGS=' rc' ARFLAGS_64BITS='' ARFLAGS_CMD='rc' ARFLAGS_DEBUG='' ARFLAGS_EXTRA='' ARFLAGS_HINTS='' ARFLAGS_OPTIM='' ATOMPAW_BIN='' AUTOCONF='${SHELL} /home/emily/abinit-8.10.2/config/gnu/missing autoconf' AUTOHEADER='${SHELL} /home/emily/abinit-8.10.2/config/gnu/missing autoheader' AUTOMAKE='${SHELL} /home/emily/abinit-8.10.2/config/gnu/missing automake-1.13' AWK='gawk' BAZAAR='' BOURNE_SHELL='/bin/sh' CC='gcc' CCDEPMODE='depmode=gcc3' CC_LDFLAGS=' ' CC_LDFLAGS_64BITS='' CC_LDFLAGS_DEBUG='' CC_LDFLAGS_EXTRA='' CC_LDFLAGS_GPU='' CC_LDFLAGS_HINTS='' CC_LDFLAGS_OPTIM='' CC_LIBS=' ' CC_LIBS_64BITS='' CC_LIBS_DEBUG='' CC_LIBS_EXTRA='' CC_LIBS_GPU='' CC_LIBS_HINTS='' CC_LIBS_OPTIM='' CFLAGS=' -g -O2 -mtune=native -march=native ' CFLAGS_64BITS='' CFLAGS_DEBUG='-g' CFLAGS_EXTRA='' CFLAGS_GPU='' CFLAGS_HINTS='' CFLAGS_OPTIM='-O2 -mtune=native -march=native' CPP='gcc -E' CPPFLAGS=' ' CPPFLAGS_64BITS='' CPPFLAGS_DEBUG='' CPPFLAGS_EXTRA='' CPPFLAGS_GPU='' CPPFLAGS_HINTS='' CPPFLAGS_HINTS_EXT='-P -std=c99' CPPFLAGS_OPTIM='' CXX='g++' CXXDEPMODE='depmode=none' CXXFLAGS=' ' CXXFLAGS_64BITS='' CXXFLAGS_DEBUG='' CXXFLAGS_EXTRA='' CXXFLAGS_GPU='' CXXFLAGS_HINTS='' CXXFLAGS_OPTIM='' CXX_LDFLAGS=' ' CXX_LDFLAGS_64BITS='' CXX_LDFLAGS_DEBUG='' CXX_LDFLAGS_EXTRA='' CXX_LDFLAGS_GPU='' CXX_LDFLAGS_HINTS='' CXX_LDFLAGS_OPTIM='' CXX_LIBS=' ' CXX_LIBS_64BITS='' CXX_LIBS_DEBUG='' CXX_LIBS_EXTRA='' CXX_LIBS_GPU='' CXX_LIBS_HINTS='' CXX_LIBS_OPTIM='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DO_BUILD_01_GSL_EXT_FALSE='' DO_BUILD_01_GSL_EXT_TRUE='' DO_BUILD_01_MACROAVNEW_EXT_FALSE='' DO_BUILD_01_MACROAVNEW_EXT_TRUE='' DO_BUILD_15_GPU_TOOLBOX_FALSE='' DO_BUILD_15_GPU_TOOLBOX_TRUE='' DO_BUILD_32_CONTRACT_FALSE='' DO_BUILD_32_CONTRACT_TRUE='#' DO_BUILD_52_MANAGE_CUDA_FALSE='' DO_BUILD_52_MANAGE_CUDA_TRUE='' DO_BUILD_65_LOTF_BASE_FALSE='' DO_BUILD_65_LOTF_BASE_TRUE='' DO_BUILD_67_TRIQS_EXT_FALSE='' DO_BUILD_67_TRIQS_EXT_TRUE='' DO_BUILD_68_LOTF_FALSE='' DO_BUILD_68_LOTF_TRUE='' DO_BUILD_CCLOCK_FALSE='' DO_BUILD_CCLOCK_TRUE='#' DO_BUILD_EXPORTS_FALSE='' DO_BUILD_EXPORTS_TRUE='' DO_BUILD_MACROAVE_FALSE='' DO_BUILD_MACROAVE_TRUE='' DO_BUILD_PSML_FALSE='' DO_BUILD_PSML_TRUE='' DO_TEST_MPI_FALSE='' DO_TEST_MPI_TRUE='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' F77='' FC='gfortran' FCFLAGS=' -g -ffree-line-length-none ' FCFLAGS_64BITS='' FCFLAGS_DEBUG='-g' FCFLAGS_EXTRA='' FCFLAGS_F90='' FCFLAGS_FIXEDFORM='-ffixed-form' FCFLAGS_FREEFORM='-ffree-form' FCFLAGS_HINTS='-ffree-line-length-none' FCFLAGS_MODDIR='-J$(abinit_moddir)' FCFLAGS_OPENMP='' FCFLAGS_OPTIM='-O2 -mtune=native -march=native' FCLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath' FC_LDFLAGS=' ' FC_LDFLAGS_64BITS='' FC_LDFLAGS_DEBUG='' FC_LDFLAGS_EXTRA='' FC_LDFLAGS_HINTS='' FC_LDFLAGS_OPTIM='' FC_LIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath' FC_LIBS_64BITS='' FC_LIBS_DEBUG='' FC_LIBS_EXTRA='' FC_LIBS_HINTS='' FC_LIBS_OPTIM='' FC_NOWRAP='' FFLAGS='' FPP='' FPPFLAGS=' ' FPPFLAGS_DEBUG='' FPPFLAGS_EXTRA='' FPPFLAGS_HINTS='' FPPFLAGS_OPTIM='' GRAPHATOM_BIN='' GREP='/bin/grep' GSL_CONFIG='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LDFLAGS=' ' LIBOBJS='' LIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lgfortran -lm -lquadmath ' LN_S='ln -s' LTLIBOBJS='' LTXFLAGS='' MAKEINFO='${SHELL} /home/emily/abinit-8.10.2/config/gnu/missing makeinfo' MDFLAGS='' MKDIR_P='/bin/mkdir -p' MODEXT='mod' MPI_2PROCS='-np 2' MPI_RUNNER='' MV='/bin/mv' NVCC='' NVCC_CFLAGS='' NVCC_CPPFLAGS='' NVCC_LDFLAGS='' NVCC_LIBS='' OBJEXT='o' PACKAGE='abinit' PACKAGE_BUGREPORT='https://bugs.launchpad.net/abinit/' PACKAGE_NAME='ABINIT' PACKAGE_STRING='ABINIT 8.10.2' PACKAGE_TARNAME='abinit' PACKAGE_URL='' PACKAGE_VERSION='8.10.2' PATCH='patch' PATH_SEPARATOR=':' PDFFLAGS='' PERL='/usr/bin/perl' PYFLAGS='' PYTHON='python' PYTHON_CPPFLAGS='-I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include' RANLIB='ranlib' REALPATH='true' RM='/bin/rm' SED='/bin/sed' SERIAL_RUNNER='' SET_MAKE='' SHELL='/bin/bash' STRIP='' TAR='tar' TRUE_CPP='cpp' VERSION='8.10.2' W90CHK2CHK_X_BIN='' WANNIER90_X_BIN='' XPP='' XPPFLAGS=' ' XPPFLAGS_DEBUG='' XPPFLAGS_EXTRA='' XPPFLAGS_OPTIM='' abi_ac_distcheck='' abi_ac_version='026900' abi_am_version='011304' abi_cc_path='' abi_cc_vendor='gnu' abi_cc_version='5.4' abi_cpp_path='' abi_cpu_64bits='yes' abi_cpu_bits='64' abi_cpu_model='core_i3' abi_cpu_platform='unknown' abi_cpu_spec='intel_core_i3' abi_cpu_vendor='intel' abi_cxx_path='' abi_cxx_vendor='generic' abi_cxx_version='0.0' abi_extra_incs='' abi_fc_path='' abi_fc_vendor='gnu' abi_fc_version='5.4' 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src_94_scfcv_incs='-I$(top_builddir)/src/94_scfcv -I$(top_srcdir)/src/94_scfcv' src_95_drive_incs='-I$(top_builddir)/src/95_drive -I$(top_srcdir)/src/95_drive' src_incs_incs='-I$(top_builddir)/src/incs -I$(top_srcdir)/src/incs' src_mods_incs='-I$(top_builddir)/src/mods -I$(top_srcdir)/src/mods' subdirs='' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' with_algo_flavor='none' with_algo_incs='' with_algo_libs='' with_atompaw_bins='' with_atompaw_incs='' with_atompaw_libs='' with_bigdft_incs='' with_bigdft_libs='' with_config_file='' with_dft_flavor='none' with_fc_vendor='' with_fc_version='' with_fft_flavor='none' with_fft_incs='' with_fft_libs='' with_gnu_ld='' with_gpu_cflags='' with_gpu_cppflags='' with_gpu_flavor='cuda-double' with_gpu_incs='' with_gpu_ldflags='' with_gpu_libs='' with_gpu_prefix='' with_libxc_incs='' with_libxc_libs='' with_linalg_flavor='netlib' with_linalg_incs='' with_linalg_libs='' with_math_flavor='none' with_math_incs='' with_math_libs='' with_mpi_incs='' with_mpi_level='' with_mpi_libs='' with_mpi_prefix='' with_netcdf_incs='' with_netcdf_libs='' with_psml_incs='' with_psml_libs='' with_tardir='' with_timer_flavor='abinit' with_timer_incs='' with_timer_libs='' with_trio_flavor='none' with_triqs_incs='' with_triqs_libs='' with_wannier90_bins='' with_wannier90_incs='' with_wannier90_libs='' with_yaml_incs='' with_yaml_libs='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "ABINIT" #define PACKAGE_TARNAME "abinit" #define PACKAGE_VERSION "8.10.2" #define PACKAGE_STRING "ABINIT 8.10.2" #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" #define PACKAGE_URL "" #define PACKAGE "abinit" #define VERSION "8.10.2" #define ABINIT_VERSION "8.10.2" #define ABINIT_VERSION_MAJOR "8" #define ABINIT_VERSION_MINOR "10" #define ABINIT_VERSION_MICRO "2" #define ABINIT_VERSION_BUILD "20190604" #define ABINIT_VERSION_BASE "8.10" #define HAVE_OS_LINUX 1 #define CC_GNU 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_MALLOC_H 1 #define FC_GNU 1 #define HAVE_FORTRAN2003 1 #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define ABINIT_TARGET "x86_64_linux_gnu5.4" #define HAVE_STDDEF_H 1 #define HAVE_STDARG_H 1 #define HAVE_STDIO_H 1 #define HAVE_MATH_H 1 #define HAVE_TERMIOS_H 1 #define HAVE_ERRNO_H 1 #define HAVE_MALLOC_H 1 #define HAVE_MCHECK_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_ABORT 1 #define HAVE_MALLINFO 1 #define SIZEOF_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_UNSIGNED_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 16 #define SIZEOF_SIZE_T 8 #define SIZEOF_PTRDIFF_T 8 #define HAVE_FC_ASYNC 1 #define HAVE_FC_BACKTRACE 1 #define HAVE_FC_COMMAND_ARGUMENT 1 #define HAVE_FC_COMMAND_LINE 1 #define HAVE_FC_SYSTEM 1 #define HAVE_FC_CONTIGUOUS 1 #define HAVE_FC_ALLOCATABLE_DTARRAYS 1 #define HAVE_FC_IEEE_EXCEPTIONS 1 #define HAVE_FC_IOMSG 1 #define HAVE_FC_ISO_C_BINDING 1 #define HAVE_FC_EXIT 1 #define HAVE_FC_FLUSH 1 #define HAVE_FC_GAMMA 1 #define HAVE_FC_GETENV 1 #define HAVE_FC_INT_QUAD 1 #define HAVE_FC_ISO_FORTRAN_2008 1 #define HAVE_FC_LONG_LINES 1 #define HAVE_FC_MOVE_ALLOC 1 #define HAVE_FC_PRIVATE 1 #define HAVE_FC_PROTECTED 1 #define HAVE_FC_STREAM_IO 1 #define HAVE_FC_CPUTIME 1 configure: exit 1