============================================================================== === Overall startup === ============================================================================== checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1711' is supported by ustar format... yes checking whether GID '1599' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether make sets $(MAKE)... (cached) yes checking whether ln -s works... yes checking for a sed that does not truncate output... /bin/sed checking for gawk... (cached) gawk checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for realpath,readlink... no configure: not loading options (no config file available) ============================================================================== === Build-system information === ============================================================================== configure: ABINIT version 8.10.1 configure: M4 010416 - Autoconf 026900 - Automake 011304 - Libtool 020402 configure: reporting user interface changes: configure: * new option --enable-triqs-v1-4 is available configure: * new option --enable-triqs-v2-0 is available configure: * new option --enable-xml is available ============================================================================== === Option consistency checking === ============================================================================== configure: checking consistency of library-related options configure: |---> all OK configure: configure: checking consistency of experimental options configure: |---> all OK configure: configure: checking consistency of maintainer options configure: |---> all OK configure: configure: parsing command-line options ============================================================================== === Multicore architecture startup === ============================================================================== configure: Initializing MPI support configure: compiler checks deferred configure: GPU support disabled from command-line ============================================================================== === Utilities === ============================================================================== checking for sh... /bin/sh checking for mv... /bin/mv checking for perl... /bin/perl checking for rm... /bin/rm checking for patch... patch checking for tar... tar ============================================================================== === C support === ============================================================================== checking for mpiicc... /apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64/mpiicc checking for gcc... mpiicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpiicc accepts -g... yes checking for mpiicc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of mpiicc... gcc3 checking how to run the C preprocessor... mpiicc -E checking which type of compiler we have... intel 17.0 checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking whether to enable assertions... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes ============================================================================== === C++ support === ============================================================================== checking for mpiicpc... /apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64/mpiicpc checking whether we are using the GNU C++ compiler... yes checking whether mpiicpc accepts -g... yes checking dependency style of mpiicpc... gcc3 checking which type of C++ compiler we have... gnu 17.0 ============================================================================== === Fortran support === ============================================================================== checking for mpiifort... /apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64/mpiifort checking whether we are using the GNU Fortran compiler... no checking whether mpiifort accepts -g... yes checking which type of Fortran compiler we have... intel 0.0 checking fortran 90 modules extension... mod checking for Fortran flag to compile .F90 files... none configure: determining Fortran module case checking whether Fortran modules are upper-case... no checking how to get verbose linking output from mpiifort... -v checking for Fortran libraries of mpiifort... -L/apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/intel64/lib/release_mt -L/apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/intel64/lib -L/apps/all/netCDF/4.4.1-intel-2017a/lib64 -L/apps/all/Szip/2.1-intel-2017a/lib -L/apps/all/cURL/7.49.1-intel-2017a/lib -L/apps/all/HDF5/1.8.17-intel-2017a/lib -L/apps/all/zlib/1.2.11/lib -L/apps/all/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 -L/apps/all/imkl/2017.1.132-iimpi-2017a/lib/intel64 -L/apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64 -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/lib -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64 -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/lib -L/apps/all/binutils/2.27-GCCcore-6.3.0/lib -L/apps/all/GCCcore/6.3.0/lib64 -L/apps/all/GCCcore/6.3.0/lib -L/apps/all/libxc/3.0.0/lib -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin -L/apps/all/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64_lin -L/apps/all/netCDF/4.4.1-intel-2017a/lib64/../lib64 -L/apps/all/netCDF/4.4.1-intel-2017a/lib64/../lib64/ -L/apps/all/GCCcore/6.3.0/lib64/../lib64 -L/apps/all/GCCcore/6.3.0/lib64/../lib64/ -L/apps/all/GCCcore/6.3.0/lib/../lib64 -L/apps/all/GCCcore/6.3.0/lib/../lib64/ -L/apps/all/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0/ -L/apps/all/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0/../../../../lib64 -L/apps/all/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/all/netCDF/4.4.1-intel-2017a/lib64/ -L/apps/all/Szip/2.1-intel-2017a/lib/ -L/apps/all/cURL/7.49.1-intel-2017a/lib/ -L/apps/all/HDF5/1.8.17-intel-2017a/lib/ -L/apps/all/zlib/1.2.11/lib/ -L/apps/all/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64/ -L/apps/all/imkl/2017.1.132-iimpi-2017a/lib/intel64/ -L/apps/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/ -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64/ -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64/ -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib/ -L/apps/all/ifort/2017.1.132-GCC-6.3.0-2.27/lib/ -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64/ -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64/ -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib/ -L/apps/all/icc/2017.1.132-GCC-6.3.0-2.27/lib/ -L/apps/all/binutils/2.27-GCCcore-6.3.0/lib/ -L/apps/all/GCCcore/6.3.0/lib64/ -L/apps/all/GCCcore/6.3.0/lib/ -L/apps/all/libxc/3.0.0/lib/ -L/apps/all/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lmpifort -lmpi -lmpigi -ldl -lrt -lpthread -lifport -lifcoremt -limf -lsvml -lm -lipgo -lirc -lirc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore ============================================================================== === Python support === ============================================================================== checking for python... python checking for Python CPPFLAGS... -I/usr/include/python2.7 checking for bzr... no checking Python.h usability... no checking Python.h presence... no checking for Python.h... no ============================================================================== === Libraries and linking === ============================================================================== checking for ar... ar checking for ranlib... ranlib ============================================================================== === Hints === ============================================================================== checking for cpp... cpp checking for a true C preprocessor... cpp checking which cpp hints to apply... default/default/default checking which cc hints to apply... intel/default/default checking which xpp hints to apply... none/none/none checking which cxx hints to apply... gnu/default/default checking which fpp hints to apply... default/default/default checking which fc hints to apply... intel/default/default checking which ar hints to apply... none/none/none checking which Fortran preprocessor to use... checking which Fortran preprocessor flags to apply... checking whether to wrap Fortran compiler calls... no ============================================================================== === Debugging === ============================================================================== checking debugging status... enabled (profile mode: basic) checking whether to activate debug mode in source files... no checking whether to activate debug verbosity in source files... no configure: debugging profile overriden by user-defined CFLAGS configure: debugging profile overriden by user-defined CXXFLAGS configure: debugging profile overriden by user-defined FCFLAGS checking whether to activate design-by-contract debugging... no ============================================================================== === Optimizations === ============================================================================== checking optimization status... enabled (using user-specified flags) checking whether to apply per-directory optimizations... no configure: fcflags_opt_43_ptgroups overriden by FCFLAGS ============================================================================== === 64-bit support === ============================================================================== checking for a 64-bit architecture... yes checking whether to use 64-bit flags... no checking for user-defined 64-bit flags... ============================================================================== === Build flags === ============================================================================== configure: static builds may be performed ============================================================================== === Advanced compiler features === ============================================================================== checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking termios.h usability... yes checking termios.h presence... yes checking for termios.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking for malloc.h... (cached) yes checking sys/malloc.h usability... no checking sys/malloc.h presence... no checking for sys/malloc.h... no checking mcheck.h usability... yes checking mcheck.h presence... yes checking for mcheck.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for abort... yes checking for mallinfo... yes checking size of char... 1 checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of unsigned int... 4 checking size of unsigned long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of size_t... 8 checking size of ptrdiff_t... 8 checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether the Fortran compiler accepts the ASYNCHRONOUS attribute... yes checking whether the Gfortran compiler supports BACKTRACE... no checking whether the Fortran compiler supports GET_COMMAND_ARGUMENT... yes checking whether the Fortran compiler supports EXECUTE_COMMAND_LINE... yes checking whether the Fortran compiler supports SYSTEM... yes checking whether the Fortran compiler accepts the CONTIGUOUS attribute... yes checking whether the Fortran compiler supports allocatable arrays in datatypes... yes checking whether the Fortran compiler supports IEEE_EXCEPTIONS... yes checking whether the Fortran compiler supports IOMSG... yes checking whether the Fortran compiler provides the iso_c_binding module... yes checking whether the Fortran compiler accepts exit()... yes checking whether the Fortran compiler accepts flush()... yes checking whether the Fortran compiler accepts flush_()... no checking whether the Fortran compiler accepts gamma()... yes checking whether the Fortran compiler accepts getenv()... yes checking whether the Fortran compiler accepts getpid()... yes checking whether the Fortran compiler accepts quadruple integers... no checking whether the Fortran compiler supports 2008 standard in ISO_FORTRAN_ENV... yes checking whether the Fortran compiler accepts long lines... yes checking whether the Fortran compiler supports \newline in CPP macros... no checking whether the Fortran compiler supports MOVE_ALLOC (F2003)... yes checking whether the Fortran compiler accepts the PRIVATE attribute... yes checking whether the Fortran compiler accepts the PROTECTED attribute... yes checking whether the Fortran compiler supports stream IO... yes checking whether the Fortran compiler accepts cpu_time()... yes checking whether the Fortran compiler accepts etime()... yes checking whether to use C clock for timings... no ============================================================================== === Multicore architecture support === ============================================================================== checking whether to enable OpenMP support... no checking whether to build MPI code... yes checking whether the C compiler supports MPI... yes checking whether the C++ compiler supports MPI... yes checking whether the Fortran Compiler supports MPI... yes checking whether MPI is usable... yes checking whether to build MPI I/O code... yes checking which level of MPI is supported by the Fortran compiler... 2 configure: forcing MPI-2 standard support checking whether the MPI library supports MPI_INTEGER16... yes checking whether the MPI library supports MPI_CREATE_TYPE_STRUCT... yes checking whether the MPI library supports MPI_IALLTOALL (MPI3)... yes checking whether the MPI library supports MPI_IALLTOALLV (MPI3)... yes checking whether the MPI library supports MPI_IALLREDUCE (MPI3)... yes checking whether to activate GPU support... no ============================================================================== === Feature triggers === ============================================================================== configure: using tarball repository /home/acamm/.abinit/tarballs checking for the requested linear algebra support... mkl+scalapack checking whether to select a fallback for linear algebra... no checking for BLAS support in specified libraries... yes checking for AXPBY support in specified BLAS libraries... yes checking for gemm3m in specified libraries... yes checking for mkl_imatcopy in specified libraries... yes checking for mkl_omatcopy in specified libraries... yes checking for mkl_omatadd in specified libraries... yes checking for mkl_set/get_threads in specified libraries... yes checking for LAPACK support in specified libraries... yes checking for LAPACKE C API support in specified libraries... no checking for BLACS support in specified libraries... yes checking for ScaLAPACK support in specified libraries... yes checking for ELPA support in specified libraries... no checking for PLASMA support in specified libraries... no checking for MAGMA (version>=1.1.0) support in specified libraries... no checking whether we have a serial linear algebra support... yes checking whether we have a MPI linear algebra support... yes checking whether we have a GPU linear algebra support... no checking for the actual linear algebra support... mkl+scalapack checking for the requested FFT support... fftw3-mkl checking for the actual FFT support... fftw3-mkl ============================================================================== === Connectors / Fallbacks === ============================================================================== checking for the requested transferable I/O support... netcdf-fallback checking whether to select a fallback for netcdf... yes checking for the actual transferable I/O support... netcdf-fallback checking for the requested timer support... abinit checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for clock_gettime in -lrt... yes checking for clock_gettime... yes checking for the actual timer support... abinit checking for the requested algorithmic support... none checking for the actual algorithmic support... none checking for the requested math support... none checking for the actual math support... none checking for the requested DFT support... libxc checking whether to select a fallback for libxc... no checking xc.h usability... yes checking xc.h presence... yes checking for xc.h... yes checking xc_funcs.h usability... yes checking xc_funcs.h presence... yes checking for xc_funcs.h... yes checking for library containing xc_func_init... -lxc checking for Fortran module includes... unknown checking for the actual DFT support... libxc-fallback configure: fallbacks to enable => libxc netcdf checking whether to build atompaw... no checking whether to build bigdft... no checking whether to build etsf_io... no checking whether to build libxc... yes checking whether to build linalg... no checking whether to build netcdf... yes checking whether to build wannier90... no configure: correcting include flags checking whether to postpone -I/usr/include for algo... no checking whether to postpone -I/usr/include for bigdft... no checking whether to postpone -I/usr/include for etsf_io... no checking whether to postpone -I/usr/include for fft... no checking whether to postpone -I/usr/include for gpu... no checking whether to postpone -I/usr/include for libxc... no checking whether to postpone -I/usr/include for linalg... no checking whether to postpone -I/usr/include for math... no checking whether to postpone -I/usr/include for mpi... no checking whether to postpone -I/usr/include for netcdf... no checking whether to postpone -I/usr/include for psml... no checking whether to postpone -I/usr/include for timer... no checking whether to postpone -I/usr/include for triqs... no checking whether to postpone -I/usr/include for wannier90... no checking whether to postpone -I/usr/include for yaml... no ============================================================================== === Experimental developments and option triggers === ============================================================================== checking whether to accelerate 'make check'... no checking whether to reduce 'make check' for packaging... checking whether to activate maintainer checks... no configure: setting triggers associated to command-line options checking whether to disable vectorization in problematic procedures... yes configure: defining the 'HAVE_AVX_SAFE_MODE' preprocessing macro checking whether to activate Bethe-Salpeter unpacking (EXPERIMENTAL)... no checking whether to activate build of exported libraries (EXPERIMENTAL)... no checking whether to activate double-precision GW calculations (EXPERIMENTAL)... no checking whether to activate internal support for libPAW in ABINIT... yes configure: defining the 'HAVE_LIBPAW_ABINIT' preprocessing macro checking whether to activate internal support for libtetra(hedron) in ABINIT... yes configure: defining the 'HAVE_LIBTETRA_ABINIT' preprocessing macro checking whether to activate LOTF functionality (EXPERIMENTAL)... no checking whether to enable build of macroave (EXPERIMENTAL)... yes configure: triggering the 'DO_BUILD_01_MACROAVNEW_EXT' conditional configure: triggering the 'DO_BUILD_MACROAVE' conditional configure: defining the 'USE_MACROAVE' preprocessing macro checking whether to enable memory profiling... checking whether to activate support for MPI_IN_PLACE... yes configure: defining the 'HAVE_MPI2_INPLACE' preprocessing macro checking whether to use MPI-IO as default IO library (change the default value of iomode) (EXPERIMENTAL)... no checking whether to use NetCDF as default IO library (change the default value of iomode)... no checking whether to activate support for OpenMP (EXPERIMENTAL)... no checking whether to tell Abinit to read file lists from standard input... yes checking whether to activate internal support for TRIQS 1.4... no checking whether to activate internal support for TRIQS 2.0 (This option is dominant over the others versions)... no checking whether to activate support for Wannier90 v1.x (default is v2.x)... no checking whether to enable support for XML... no checking whether to activate workaround for bugged ZDOTC and ZDOTU... no ============================================================================== === Subsystems === ============================================================================== configure: setting-up bindings (type: subsystem, mode: detached) configure: setting-up doc (type: subsystem, mode: detached) configure: setting-up fallbacks (type: subsystem, mode: attached) configure: setting-up tests (type: subsystem, mode: attached) ============================================================================== === Output === ============================================================================== checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating config.dump config.status: creating config.pc config.status: creating config.sh config.status: creating bindings/config.sh config.status: creating config/wrappers/wrap-fc config.status: creating fallbacks/config.mk config.status: creating abichecks/Makefile config.status: creating abichecks/abichecks.env config.status: creating src/incs/Makefile config.status: creating src/mods/Makefile config.status: creating src/10_dumpinfo/m_build_info.F90 config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/01_gsl_ext/Makefile config.status: creating src/02_clib/Makefile config.status: creating src/10_defs/Makefile config.status: creating src/10_dumpinfo/Makefile config.status: creating src/11_memory_mpi/Makefile config.status: creating src/12_hide_mpi/Makefile config.status: creating src/14_hidewrite/Makefile config.status: creating src/15_gpu_toolbox/Makefile config.status: creating src/16_hideleave/Makefile config.status: creating src/17_libtetra_ext/Makefile config.status: creating src/18_timing/Makefile config.status: creating src/21_hashfuncs/Makefile config.status: creating src/27_toolbox_oop/Makefile config.status: creating src/28_numeric_noabirule/Makefile config.status: creating src/29_kpoints/Makefile config.status: creating src/32_util/Makefile config.status: creating src/41_geometry/Makefile config.status: creating src/41_xc_lowlevel/Makefile config.status: creating src/42_libpaw/Makefile config.status: creating src/42_nlstrain/Makefile config.status: creating src/42_parser/Makefile config.status: creating src/43_ptgroups/Makefile config.status: creating src/43_wvl_wrappers/Makefile config.status: creating src/44_abitools/Makefile config.status: creating src/44_abitypes_defs/Makefile config.status: creating src/45_geomoptim/Makefile config.status: creating src/45_xgTools/Makefile config.status: creating src/46_diago/Makefile config.status: creating src/49_gw_toolbox_oop/Makefile config.status: creating src/51_manage_mpi/Makefile config.status: creating src/52_fft_mpi_noabirule/Makefile config.status: creating src/52_manage_cuda/Makefile config.status: creating src/53_ffts/Makefile config.status: creating src/54_spacepar/Makefile config.status: creating src/55_abiutil/Makefile config.status: creating src/56_io_mpi/Makefile config.status: creating src/56_mixing/Makefile config.status: creating src/56_recipspace/Makefile config.status: creating src/56_xc/Makefile config.status: creating src/57_iopsp_parser/Makefile config.status: creating src/57_iovars/Makefile config.status: creating src/59_ionetcdf/Makefile config.status: creating src/61_occeig/Makefile config.status: creating src/62_cg_noabirule/Makefile config.status: creating src/62_ctqmc/Makefile config.status: creating src/62_iowfdenpot/Makefile config.status: creating src/62_poisson/Makefile config.status: creating src/62_wvl_wfs/Makefile config.status: creating src/63_bader/Makefile config.status: creating src/64_psp/Makefile config.status: creating src/65_lotf_base/Makefile config.status: creating src/65_paw/Makefile config.status: creating src/66_nonlocal/Makefile config.status: creating src/66_vdwxc/Makefile config.status: creating src/66_wfs/Makefile config.status: creating src/67_common/Makefile config.status: creating src/67_triqs_ext/Makefile config.status: creating src/68_dmft/Makefile config.status: creating src/68_lotf/Makefile config.status: creating src/68_recursion/Makefile config.status: creating src/68_rsprc/Makefile config.status: creating src/69_wfdesc/Makefile config.status: creating src/70_gw/Makefile config.status: creating src/71_bse/Makefile config.status: creating src/71_wannier/Makefile config.status: creating src/72_response/Makefile config.status: creating src/77_ddb/Makefile config.status: creating src/77_suscep/Makefile config.status: creating src/78_effpot/Makefile config.status: creating src/78_eph/Makefile config.status: creating src/79_seqpar_mpi/Makefile config.status: creating src/80_tdep/Makefile config.status: creating src/83_cut3d/Makefile config.status: creating src/84_fold2Bloch/Makefile config.status: creating src/94_scfcv/Makefile config.status: creating src/95_drive/Makefile config.status: creating src/98_main/Makefile config.status: creating src/libs/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing dump-optim commands config.status: executing script-perms commands config.status: executing long-lines commands === configuring in fallbacks (/home/acamm/software/abinit-8.10.1/fallbacks) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/home/acamm/bin/abinit-8.10.1' '--enable-mpi' '--enable-mpi-io' '--enable-optim' '--with-dft-flavor=libxc' '--with-mpi-level=2' '--enable-mpi-inplace' '--with-trio-flavor=netcdf-fallback' '--enable-fallbacks' '--enable-avx-safe-mode' '--with-fc-vendor=intel' '--with-fft-flavor=fftw3-mkl' '--with-fft-libs=-lmkl_intel_lp64 -lmkl_sequential -lmkl_core' '--with-linalg-flavor=mkl+scalapack' '--with-linalg-libs=-lmkl_scalapack_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lmkl_blacs_intelmpi_lp64 -lpthread -lm -ldl' 'FCFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'FFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'CFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'CXXFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'FC=mpiifort' 'CC=mpiicc' 'CXX=mpiicpc' '--enable-atompaw=no' '--enable-bigdft=no' '--enable-etsf-io=no' '--enable-libxc=yes' '--enable-linalg=no' '--enable-netcdf=yes' '--enable-wannier90=no' '--with-fc-vendor=intel' '--with-fc-version=0.0' '--with-tardir=/home/acamm/.abinit/tarballs' --cache-file=/dev/null --srcdir=. checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make sets $(MAKE)... (cached) yes checking whether ln -s works... yes checking for a sed that does not truncate output... /bin/sed checking for gawk... (cached) gawk checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E configure: setting Fortran compiler vendor to intel configure: setting Fortran compiler version to 0.0 configure: setting tarball repository to /home/acamm/.abinit/tarballs configure: checking consistency of fallback options checking for wget... wget checking for curl... curl configure: using tarball repository /home/acamm/.abinit/tarballs checking for patch... patch checking for gcc... mpiicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpiicc accepts -g... yes checking for mpiicc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of mpiicc... none checking whether we are using the GNU Fortran compiler... no checking whether mpiifort accepts -g... yes checking whether to enable the LINALG fallback... no checking whether to enable the NETCDF fallback... yes checking for a source tarball of NETCDF... yes checking for md5sum... md5sum configure: tarball MD5 check succeeded configure: applying NetCDF tricks (vendor: intel, version: 0.0) configure: CFGFLAGS_NETCDF = --disable-cxx --disable-cxx-4 --disable-dap --disable-hdf4 --disable-netcdf4 --enable-fortran --enable-static --disable-shared configure: CPPFLAGS_NETCDF = -DNDEBUG -DpgiFortran configure: FCFLAGS_NETCDF = -DNDEBUG -DpgiFortran -O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays checking whether to enable the ETSF_IO fallback... no checking whether to enable the LIBXC fallback... yes checking for a source tarball of LIBXC... yes configure: tarball MD5 check succeeded configure: applying LIBXC tricks configure: CFGFLAGS_LIBXC = --enable-fortran --enable-static --disable-shared configure: CFLAGS_LIBXC = -O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays checking whether to enable the ATOMPAW fallback... no checking whether to enable the BIGDFT fallback... no checking whether to enable the WANNIER90 fallback... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: executing depfiles commands === configuring in tests (/home/acamm/software/abinit-8.10.1/tests) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/home/acamm/bin/abinit-8.10.1' '--enable-mpi' '--enable-mpi-io' '--enable-optim' '--with-dft-flavor=libxc' '--with-mpi-level=2' '--enable-mpi-inplace' '--with-trio-flavor=netcdf-fallback' '--enable-fallbacks' '--enable-avx-safe-mode' '--with-fc-vendor=intel' '--with-fft-flavor=fftw3-mkl' '--with-fft-libs=-lmkl_intel_lp64 -lmkl_sequential -lmkl_core' '--with-linalg-flavor=mkl+scalapack' '--with-linalg-libs=-lmkl_scalapack_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lmkl_blacs_intelmpi_lp64 -lpthread -lm -ldl' 'FCFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'FFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'CFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'CXXFLAGS=-O2 -axCORE-AVX2 -xavx -mkl -fp-model precise -heap-arrays ' 'FC=mpiifort' 'CC=mpiicc' 'CXX=mpiicpc' '--enable-atompaw=no' '--enable-bigdft=no' '--enable-etsf-io=no' '--enable-libxc=yes' '--enable-linalg=no' '--enable-netcdf=yes' '--enable-wannier90=no' '--with-fc-vendor=intel' '--with-fc-version=0.0' '--with-tardir=/home/acamm/.abinit/tarballs' --cache-file=/dev/null --srcdir=. checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make sets $(MAKE)... (cached) yes checking whether ln -s works... yes checking for a sed that does not truncate output... /bin/sed checking for gawk... (cached) gawk checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for perl... perl checking for python... python checking for gcc... mpiicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpiicc accepts -g... yes checking for mpiicc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of mpiicc... gcc3 checking timeout for automatic tests... none checking whether to build test timeout code... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Timeout/Makefile config.status: executing depfiles commands ============================================================================== === Final remarks === ============================================================================== +--------------------------------------------------------------+ | About the Intel Fortran compiler | +--------------------------------------------------------------+ | Your compiler will work properly only if the LD_LIBRARY_PATH | | and INTEL_LICENSE_FILE environment variables are correctly | | set-up. Please make sure that this is the case before | | building ABINIT. | | | | In most cases it means sourcing a script in the Intel | | compiler install directory, e.g.: | | | | . /opt/intel/fc/9.1/bin/ifortvars.sh | | | | for a Bourne-like shell (do not forget the leading dot), or | | | | source /opt/intel/fc/9.1/bin/ifortvars.csh | | | | for a C-like shell. | | | | If you do not know what this is all about, please refer to | | the Intel documentation or ask your system administrator. | | | | Please note that the same holds for the Intel C and C++ | | compilers. | +--------------------------------------------------------------+ Summary of important options: * C compiler : intel version 17.0 * Fortran compiler: intel version 0.0 * architecture : intel xeon (64 bits) * debugging : basic * optimizations : yes * OpenMP enabled : no (collapse: ignored) * MPI enabled : yes * MPI-IO enabled : yes * GPU enabled : no (flavor: none) * TRIO flavor = netcdf-fallback * TIMER flavor = abinit (libs: ignored) * LINALG flavor = mkl+scalapack (libs: user-defined) * ALGO flavor = none (libs: ignored) * FFT flavor = fftw3-mkl (libs: user-defined) * MATH flavor = none (libs: ignored) * DFT flavor = libxc-fallback Configuration complete. You may now type "make" to build ABINIT. (or, on a SMP machine, "make mj4", or "make multi multi_nprocs=")